Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ATXN3P54252 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.02□□□□□ -0.01
ATXN3P54252 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
ATXN3P54252 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
ATXN3P54252 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.02□□□□□ -0.01
ATXN3P54252 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ATXN3P54252 MIR33B-201ENST00000385104 96 ntBASIC15.01□□□□□ -0.01
ATXN3P54252 AL645937.2-201ENST00000396808 931 ntBASIC15.01□□□□□ -0.01
ATXN3P54252 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.01□□□□□ -0.01
ATXN3P54252 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 AC087386.2-201ENST00000623212 4637 ntBASIC15.01□□□□□ -0.01
ATXN3P54252 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
ATXN3P54252 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 AC027601.5-201ENST00000624065 2482 ntBASIC15.01□□□□□ -0.01
ATXN3P54252 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.01□□□□□ -0.01
ATXN3P54252 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.01□□□□□ -0.01
ATXN3P54252 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATXN3P54252 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
ATXN3P54252 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15□□□□□ -0.01
ATXN3P54252 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
ATXN3P54252 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15□□□□□ -0.01
ATXN3P54252 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 KRT8P29-201ENST00000420409 1371 ntBASIC15□□□□□ -0.01
ATXN3P54252 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15□□□□□ -0.01
ATXN3P54252 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15□□□□□ -0.01
ATXN3P54252 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ATXN3P54252 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15□□□□□ -0.01
ATXN3P54252 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ATXN3P54252 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ATXN3P54252 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15□□□□□ -0.01
ATXN3P54252 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15□□□□□ -0.01
ATXN3P54252 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15□□□□□ -0.01
ATXN3P54252 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATXN3P54252 EEF1DP6-201ENST00000449232 372 ntBASIC15□□□□□ -0.01
ATXN3P54252 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15□□□□□ -0.01
ATXN3P54252 FTLP10-202ENST00000505798 471 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms