Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC3P51654 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.04■□□□□ 0.16
GPC3P51654 AC012044.1-201ENST00000603431 297 ntBASIC16.04■□□□□ 0.16
GPC3P51654 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GPC3P51654 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GPC3P51654 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.03■□□□□ 0.16
GPC3P51654 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.03■□□□□ 0.16
GPC3P51654 AC234782.1-201ENST00000451950 919 ntBASIC16.03■□□□□ 0.16
GPC3P51654 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
GPC3P51654 PGAM1P5-201ENST00000548011 764 ntBASIC16.03■□□□□ 0.16
GPC3P51654 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
GPC3P51654 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 LINC01165-201ENST00000445190 1623 ntBASIC16.03■□□□□ 0.16
GPC3P51654 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GPC3P51654 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.03■□□□□ 0.16
GPC3P51654 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GPC3P51654 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC3P51654 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC3P51654 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 AC026748.1-201ENST00000624349 3251 ntBASIC16.02■□□□□ 0.16
GPC3P51654 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GPC3P51654 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
GPC3P51654 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC3P51654 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC3P51654 ST13P19-201ENST00000442505 1124 ntBASIC16.02■□□□□ 0.16
GPC3P51654 CEP164P1-201ENST00000455142 418 ntBASIC16.02■□□□□ 0.16
GPC3P51654 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.02■□□□□ 0.16
GPC3P51654 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC3P51654 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.02■□□□□ 0.16
GPC3P51654 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.02■□□□□ 0.16
GPC3P51654 MIR3188-201ENST00000583494 85 ntBASIC16.02■□□□□ 0.16
GPC3P51654 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.02■□□□□ 0.16
GPC3P51654 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.02■□□□□ 0.16
GPC3P51654 AC006453.1-201ENST00000636037 1257 ntBASIC16.02■□□□□ 0.16
GPC3P51654 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms