Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 FXNP2-201ENST00000411625 547 ntBASIC13.03□□□□□ -0.32
ASCL1P50553 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 AL596276.2-201ENST00000447525 331 ntBASIC13.03□□□□□ -0.32
ASCL1P50553 EEF1DP6-201ENST00000449232 372 ntBASIC13.03□□□□□ -0.32
ASCL1P50553 HLA-J-204ENST00000495278 958 ntBASIC13.03□□□□□ -0.32
ASCL1P50553 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.03□□□□□ -0.32
ASCL1P50553 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ASCL1P50553 AL353770.1-201ENST00000614915 403 ntBASIC13.03□□□□□ -0.32
ASCL1P50553 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ASCL1P50553 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ASCL1P50553 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.03□□□□□ -0.32
ASCL1P50553 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ASCL1P50553 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ASCL1P50553 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.02□□□□□ -0.32
ASCL1P50553 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
ASCL1P50553 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.02□□□□□ -0.32
ASCL1P50553 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ASCL1P50553 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.02□□□□□ -0.32
ASCL1P50553 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.02□□□□□ -0.33
ASCL1P50553 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.02□□□□□ -0.33
ASCL1P50553 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.02□□□□□ -0.33
ASCL1P50553 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 ISCA2P1-201ENST00000425548 448 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 AL035414.1-201ENST00000451327 857 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 AC234782.1-201ENST00000451950 919 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 MPRIPP1-201ENST00000452433 1089 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.02□□□□□ -0.33
ASCL1P50553 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.02□□□□□ -0.33
ASCL1P50553 AC020922.3-201ENST00000595064 547 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ASCL1P50553 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.02□□□□□ -0.33
ASCL1P50553 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.02□□□□□ -0.33
ASCL1P50553 MIR6720-201ENST00000611664 98 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.02□□□□□ -0.33
ASCL1P50553 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ASCL1P50553 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ASCL1P50553 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 SALL4P5-201ENST00000419001 1760 ntBASIC13.02□□□□□ -0.33
ASCL1P50553 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.02□□□□□ -0.33
ASCL1P50553 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ASCL1P50553 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.02□□□□□ -0.33
ASCL1P50553 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ASCL1P50553 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ASCL1P50553 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ASCL1P50553 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ASCL1P50553 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.01□□□□□ -0.33
ASCL1P50553 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms