Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 SLC25A15P3-201ENST00000505530 290 ntBASIC21.12■□□□□ 0.97
HFM1A2PYH4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC21.12■□□□□ 0.97
HFM1A2PYH4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HFM1A2PYH4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 RPL3P2-204ENST00000413027 1203 ntBASIC21.11■□□□□ 0.97
HFM1A2PYH4 AL592076.1-201ENST00000424448 303 ntBASIC21.11■□□□□ 0.97
HFM1A2PYH4 ERP29P1-201ENST00000442902 706 ntBASIC21.11■□□□□ 0.97
HFM1A2PYH4 RN7SL788P-201ENST00000460504 316 ntBASIC21.11■□□□□ 0.97
HFM1A2PYH4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 AC092171.5-201ENST00000608012 942 ntBASIC21.11■□□□□ 0.97
HFM1A2PYH4 MIR6842-201ENST00000612539 65 ntBASIC21.11■□□□□ 0.97
HFM1A2PYH4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC21.11■□□□□ 0.97
HFM1A2PYH4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HFM1A2PYH4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 AC006372.4-201ENST00000624122 1543 ntBASIC21.1■□□□□ 0.97
HFM1A2PYH4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 TUBB4AP1-201ENST00000450755 1325 ntBASIC21.1■□□□□ 0.97
HFM1A2PYH4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 MST1P2-201ENST00000457982 2291 ntBASIC21.1■□□□□ 0.97
HFM1A2PYH4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 AC098935.1-201ENST00000446057 611 ntBASIC21.1■□□□□ 0.97
HFM1A2PYH4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 AL031713.1-201ENST00000564813 661 ntBASIC21.1■□□□□ 0.97
HFM1A2PYH4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC21.1■□□□□ 0.97
HFM1A2PYH4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HFM1A2PYH4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AL139158.3-201ENST00000641212 1562 ntBASIC21.09■□□□□ 0.97
HFM1A2PYH4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms