Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 IGLV3-15-201ENST00000518356 244 ntBASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC092299.1-201ENST00000632679 757 ntBASIC16.94■□□□□ 0.3
SLF1Q9BQI6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 AC139712.1-201ENST00000378256 1875 ntBASIC16.94■□□□□ 0.3
SLF1Q9BQI6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 CICP14-201ENST00000629111 2732 ntBASIC16.94■□□□□ 0.3
SLF1Q9BQI6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 MIR4706-201ENST00000582134 82 ntBASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLF1Q9BQI6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 AC140479.7-201ENST00000636301 2332 ntBASIC16.92■□□□□ 0.3
SLF1Q9BQI6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms