Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.27■□□□□ 0.84
TMC1Q8TDI8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 AL133499.1-201ENST00000596207 608 ntBASIC20.27■□□□□ 0.84
TMC1Q8TDI8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 AC097376.2-205ENST00000610159 5334 ntBASIC20.27■□□□□ 0.84
TMC1Q8TDI8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMC1Q8TDI8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMC1Q8TDI8 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.27■□□□□ 0.83
TMC1Q8TDI8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 KRT8P28-201ENST00000433288 1390 ntBASIC20.26■□□□□ 0.83
TMC1Q8TDI8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 AC020922.3-201ENST00000595064 547 ntBASIC20.26■□□□□ 0.83
TMC1Q8TDI8 AC079336.7-201ENST00000623428 1078 ntBASIC20.26■□□□□ 0.83
TMC1Q8TDI8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 AL354702.1-201ENST00000442006 1960 ntBASIC20.26■□□□□ 0.83
TMC1Q8TDI8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMC1Q8TDI8 BX640514.1-201ENST00000583223 1918 ntBASIC20.25■□□□□ 0.83
TMC1Q8TDI8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 AC073150.1-201ENST00000450406 1084 ntBASIC20.25■□□□□ 0.83
TMC1Q8TDI8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 AC103988.2-201ENST00000561804 725 ntBASIC20.25■□□□□ 0.83
TMC1Q8TDI8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 MIR3907-201ENST00000579424 151 ntBASIC20.25■□□□□ 0.83
TMC1Q8TDI8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 AL157813.1-201ENST00000612996 587 ntBASIC20.25■□□□□ 0.83
TMC1Q8TDI8 AC133540.1-201ENST00000620845 1019 ntBASIC20.25■□□□□ 0.83
TMC1Q8TDI8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMC1Q8TDI8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms