Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 ABCD1P2-201ENST00000429313 1601 ntBASIC13.35□□□□□ -0.27
RBM48Q5RL73 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 AL445250.1-201ENST00000641671 2259 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 AK2P2-201ENST00000439142 405 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 AL591424.1-201ENST00000442569 1213 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 AC009078.2-202ENST00000463353 338 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 AC103988.2-201ENST00000561804 725 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 AC140113.2-201ENST00000604370 208 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 AC060814.4-201ENST00000594169 2163 ntBASIC13.34□□□□□ -0.27
RBM48Q5RL73 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RBM48Q5RL73 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.34□□□□□ -0.27
RBM48Q5RL73 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RBM48Q5RL73 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RBM48Q5RL73 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.33□□□□□ -0.27
RBM48Q5RL73 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
RBM48Q5RL73 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RBM48Q5RL73 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AGGF1P10-201ENST00000635005 2191 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 USP17L6P-201ENST00000382470 1197 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AC004832.2-201ENST00000426397 482 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms