Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 KLF2P2-201ENST00000416807 1039 ntBASIC12.04□□□□□ -0.48
SUPT4H1P63272 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 AC114812.1-204ENST00000449669 728 ntBASIC12.04□□□□□ -0.48
SUPT4H1P63272 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.04□□□□□ -0.48
SUPT4H1P63272 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.04□□□□□ -0.48
SUPT4H1P63272 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SUPT4H1P63272 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 CES1P1-201ENST00000421606 1704 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SPDYE18-201ENST00000510091 1050 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC027369.6-201ENST00000525520 931 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 MIR3687-2-201ENST00000577708 61 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC104506.1-201ENST00000609247 429 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 MIR3687-1-201ENST00000614492 61 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC007431.3-201ENST00000623221 587 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 AC004623.1-201ENST00000624592 2127 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.03□□□□□ -0.48
SUPT4H1P63272 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SUPT4H1P63272 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SUPT4H1P63272 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms