Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC005252.3-201ENST00000623855 2258 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC131235.2-201ENST00000445553 1057 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 BCRP4-201ENST00000506079 804 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 PHBP15-201ENST00000574228 665 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 NF1P11-201ENST00000621292 1282 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC021305.1-201ENST00000520656 1514 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC097376.2-205ENST00000610159 5334 ntBASIC12.2□□□□□ -0.46
RIPPLY3P57055 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 AC118758.2-201ENST00000614242 2813 ntBASIC12.19□□□□□ -0.46
RIPPLY3P57055 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 AL121949.1-201ENST00000402043 968 ntBASIC12.19□□□□□ -0.46
RIPPLY3P57055 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.19□□□□□ -0.46
RIPPLY3P57055 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 HLA-J-204ENST00000495278 958 ntBASIC12.19□□□□□ -0.46
RIPPLY3P57055 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 GPX3-202ENST00000517973 612 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 AC008805.1-201ENST00000590892 364 ntBASIC12.19□□□□□ -0.46
RIPPLY3P57055 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RIPPLY3P57055 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms