Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CAV3P56539 AL096865.1-201ENST00000606796 927 ntBASIC13.11□□□□□ -0.31
CAV3P56539 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CAV3P56539 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.11□□□□□ -0.31
CAV3P56539 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CAV3P56539 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.11□□□□□ -0.31
CAV3P56539 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 BEND3P3-201ENST00000611030 2440 ntBASIC13.11□□□□□ -0.31
CAV3P56539 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CAV3P56539 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CAV3P56539 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 AC090643.2-201ENST00000623442 2029 ntBASIC13.1□□□□□ -0.31
CAV3P56539 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 AL122018.1-201ENST00000446607 2310 ntBASIC13.1□□□□□ -0.31
CAV3P56539 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.1□□□□□ -0.31
CAV3P56539 RPL13P2-201ENST00000440687 659 ntBASIC13.1□□□□□ -0.31
CAV3P56539 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.1□□□□□ -0.31
CAV3P56539 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.1□□□□□ -0.31
CAV3P56539 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.1□□□□□ -0.31
CAV3P56539 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.1□□□□□ -0.31
CAV3P56539 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.1□□□□□ -0.31
CAV3P56539 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 AC135586.1-201ENST00000539323 574 ntBASIC13.1□□□□□ -0.31
CAV3P56539 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 SPCS2P1-201ENST00000561636 679 ntBASIC13.1□□□□□ -0.31
CAV3P56539 AC092337.1-201ENST00000568699 1129 ntBASIC13.1□□□□□ -0.31
CAV3P56539 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.1□□□□□ -0.31
CAV3P56539 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.1□□□□□ -0.31
CAV3P56539 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CAV3P56539 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CAV3P56539 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.09□□□□□ -0.31
CAV3P56539 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CAV3P56539 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.09□□□□□ -0.31
CAV3P56539 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.09□□□□□ -0.31
CAV3P56539 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CAV3P56539 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.09□□□□□ -0.31
CAV3P56539 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms