Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.89■□□□□ 0.13
NCKAP1LP55160 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 AC092580.1-201ENST00000433998 658 ntBASIC15.89■□□□□ 0.13
NCKAP1LP55160 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.89■□□□□ 0.13
NCKAP1LP55160 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 AC011742.3-201ENST00000439053 820 ntBASIC15.88■□□□□ 0.13
NCKAP1LP55160 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 HIST2H2BC-201ENST00000498492 580 ntBASIC15.88■□□□□ 0.13
NCKAP1LP55160 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 AL805961.1-203ENST00000641078 1258 ntBASIC15.88■□□□□ 0.13
NCKAP1LP55160 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 CICP16-201ENST00000502609 2813 ntBASIC15.88■□□□□ 0.13
NCKAP1LP55160 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 TUBB8P4-201ENST00000511806 1324 ntBASIC15.88■□□□□ 0.13
NCKAP1LP55160 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
NCKAP1LP55160 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NCKAP1LP55160 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 FNTAP2-201ENST00000430308 634 ntBASIC15.87■□□□□ 0.13
NCKAP1LP55160 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.87■□□□□ 0.13
NCKAP1LP55160 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCKAP1LP55160 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms