Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT9P35527 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KRT9P35527 AC012441.1-201ENST00000446669 685 ntBASIC16.02■□□□□ 0.16
KRT9P35527 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT9P35527 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT9P35527 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
KRT9P35527 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.02■□□□□ 0.16
KRT9P35527 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT9P35527 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT9P35527 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT9P35527 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
KRT9P35527 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
KRT9P35527 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT9P35527 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
KRT9P35527 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
KRT9P35527 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
KRT9P35527 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
KRT9P35527 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT9P35527 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
KRT9P35527 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT9P35527 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.02■□□□□ 0.15
KRT9P35527 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.01■□□□□ 0.15
KRT9P35527 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 AL157996.1-201ENST00000624684 2299 ntBASIC16.01■□□□□ 0.15
KRT9P35527 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 TCAF1P1-201ENST00000414990 2232 ntBASIC16.01■□□□□ 0.15
KRT9P35527 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 RN7SKP230-201ENST00000365642 335 ntBASIC16.01■□□□□ 0.15
KRT9P35527 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT9P35527 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT9P35527 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 MIR5189-201ENST00000577370 114 ntBASIC16.01■□□□□ 0.15
KRT9P35527 MIR3197-201ENST00000582241 73 ntBASIC16.01■□□□□ 0.15
KRT9P35527 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT9P35527 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KRT9P35527 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT9P35527 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16■□□□□ 0.15
KRT9P35527 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16■□□□□ 0.15
KRT9P35527 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT9P35527 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT9P35527 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16■□□□□ 0.15
KRT9P35527 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT9P35527 AC139712.1-201ENST00000378256 1875 ntBASIC16■□□□□ 0.15
KRT9P35527 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
KRT9P35527 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms