Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TM4SF1P30408 RN7SL121P-201ENST00000584223 273 ntBASIC17.7■□□□□ 0.42
TM4SF1P30408 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TM4SF1P30408 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.7■□□□□ 0.42
TM4SF1P30408 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.7■□□□□ 0.42
TM4SF1P30408 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TM4SF1P30408 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TM4SF1P30408 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF1P30408 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF1P30408 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.7■□□□□ 0.42
TM4SF1P30408 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF1P30408 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 TBC1D27-202ENST00000424239 1573 ntBASIC17.7■□□□□ 0.42
TM4SF1P30408 SHMT1P1-201ENST00000419974 1312 ntBASIC17.7■□□□□ 0.42
TM4SF1P30408 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
TM4SF1P30408 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TM4SF1P30408 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.69■□□□□ 0.42
TM4SF1P30408 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.69■□□□□ 0.42
TM4SF1P30408 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.69■□□□□ 0.42
TM4SF1P30408 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.69■□□□□ 0.42
TM4SF1P30408 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.69■□□□□ 0.42
TM4SF1P30408 AC092903.1-201ENST00000466506 262 ntBASIC17.69■□□□□ 0.42
TM4SF1P30408 IGHEP2-201ENST00000519308 1256 ntBASIC17.69■□□□□ 0.42
TM4SF1P30408 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.69■□□□□ 0.42
TM4SF1P30408 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.69■□□□□ 0.42
TM4SF1P30408 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.69■□□□□ 0.42
TM4SF1P30408 FTLP5-201ENST00000586853 534 ntBASIC17.69■□□□□ 0.42
TM4SF1P30408 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.69■□□□□ 0.42
TM4SF1P30408 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
TM4SF1P30408 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.69■□□□□ 0.42
TM4SF1P30408 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
TM4SF1P30408 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.69■□□□□ 0.42
TM4SF1P30408 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TM4SF1P30408 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TM4SF1P30408 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF1P30408 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 BRI3P1-201ENST00000440440 378 ntBASIC17.68■□□□□ 0.42
TM4SF1P30408 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF1P30408 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 AL512310.5-201ENST00000551999 515 ntBASIC17.68■□□□□ 0.42
TM4SF1P30408 AC005777.1-201ENST00000588332 187 ntBASIC17.68■□□□□ 0.42
TM4SF1P30408 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TM4SF1P30408 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF1P30408 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms