Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.71■□□□□ 0.27
TPM2P07951 DNAJB3-202ENST00000449667 1266 ntBASIC16.71■□□□□ 0.27
TPM2P07951 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM2P07951 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.71■□□□□ 0.27
TPM2P07951 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM2P07951 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM2P07951 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TPM2P07951 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TPM2P07951 AL158211.3-201ENST00000607385 239 ntBASIC16.71■□□□□ 0.27
TPM2P07951 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.71■□□□□ 0.27
TPM2P07951 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
TPM2P07951 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC16.71■□□□□ 0.27
TPM2P07951 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TPM2P07951 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM2P07951 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM2P07951 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TPM2P07951 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
TPM2P07951 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 POM121L4P-202ENST00000427789 1891 ntBASIC16.7■□□□□ 0.26
TPM2P07951 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.7■□□□□ 0.26
TPM2P07951 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM2P07951 MEIS3P1-201ENST00000495167 958 ntBASIC16.7■□□□□ 0.26
TPM2P07951 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 AC092337.1-201ENST00000568699 1129 ntBASIC16.7■□□□□ 0.26
TPM2P07951 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM2P07951 AC015911.4-201ENST00000588022 1070 ntBASIC16.7■□□□□ 0.26
TPM2P07951 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.7■□□□□ 0.26
TPM2P07951 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM2P07951 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM2P07951 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM2P07951 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM2P07951 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM2P07951 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TPM2P07951 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TPM2P07951 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM2P07951 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TPM2P07951 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM2P07951 AC018665.1-201ENST00000622927 1362 ntBASIC16.69■□□□□ 0.26
TPM2P07951 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM2P07951 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM2P07951 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM2P07951 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM2P07951 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM2P07951 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.69■□□□□ 0.26
TPM2P07951 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM2P07951 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM2P07951 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms