Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYTH3O43739 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYTH3O43739 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CYTH3O43739 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CYTH3O43739 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CYTH3O43739 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CYTH3O43739 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CYTH3O43739 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CYTH3O43739 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CYTH3O43739 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CYTH3O43739 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CYTH3O43739 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CYTH3O43739 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.64■□□□□ 0.25
CYTH3O43739 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.64■□□□□ 0.25
CYTH3O43739 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CYTH3O43739 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CYTH3O43739 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.64■□□□□ 0.25
CYTH3O43739 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.64■□□□□ 0.25
CYTH3O43739 Z97180.1-201ENST00000445173 988 ntBASIC16.64■□□□□ 0.25
CYTH3O43739 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.64■□□□□ 0.25
CYTH3O43739 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.64■□□□□ 0.25
CYTH3O43739 AC020922.3-201ENST00000595064 547 ntBASIC16.64■□□□□ 0.25
CYTH3O43739 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.64■□□□□ 0.25
CYTH3O43739 AC091812.3-201ENST00000621362 345 ntBASIC16.64■□□□□ 0.25
CYTH3O43739 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CYTH3O43739 HSPA7-201ENST00000445535 1927 ntBASIC16.64■□□□□ 0.25
CYTH3O43739 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.64■□□□□ 0.25
CYTH3O43739 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYTH3O43739 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.64■□□□□ 0.25
CYTH3O43739 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 AL009178.2-201ENST00000597278 2719 ntBASIC16.63■□□□□ 0.25
CYTH3O43739 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 SNX18-202ENST00000343017 3140 ntBASIC16.63■□□□□ 0.25
CYTH3O43739 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.63■□□□□ 0.25
CYTH3O43739 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 AL662890.1-201ENST00000396818 632 ntBASIC16.63■□□□□ 0.25
CYTH3O43739 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.63■□□□□ 0.25
CYTH3O43739 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.63■□□□□ 0.25
CYTH3O43739 RN7SL277P-201ENST00000481521 288 ntBASIC16.63■□□□□ 0.25
CYTH3O43739 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.63■□□□□ 0.25
CYTH3O43739 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 AC093752.3-201ENST00000567343 901 ntBASIC16.63■□□□□ 0.25
CYTH3O43739 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.63■□□□□ 0.25
CYTH3O43739 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 AC016397.2-201ENST00000624848 1985 ntBASIC16.63■□□□□ 0.25
CYTH3O43739 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CYTH3O43739 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CYTH3O43739 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYTH3O43739 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms