Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDN5O00501 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.34■□□□□ 0.05
CLDN5O00501 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN5O00501 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN5O00501 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.33■□□□□ 0.05
CLDN5O00501 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN5O00501 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN5O00501 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN5O00501 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN5O00501 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN5O00501 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.33■□□□□ 0.05
CLDN5O00501 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 AL008707.1-201ENST00000422498 534 ntBASIC15.33■□□□□ 0.04
CLDN5O00501 AC024681.1-201ENST00000521917 487 ntBASIC15.33■□□□□ 0.04
CLDN5O00501 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CLDN5O00501 MIR6074-201ENST00000612054 107 ntBASIC15.33■□□□□ 0.04
CLDN5O00501 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.33■□□□□ 0.04
CLDN5O00501 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLDN5O00501 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CLDN5O00501 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN5O00501 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN5O00501 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDN5O00501 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN5O00501 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN5O00501 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 AC090505.1-201ENST00000430515 1834 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN5O00501 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLDN5O00501 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CLDN5O00501 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 ISCA2P1-201ENST00000425548 448 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN5O00501 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 AL596276.2-201ENST00000447525 331 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 AC090857.1-201ENST00000527400 390 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN5O00501 RN7SL574P-201ENST00000581512 297 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.32■□□□□ 0.04
CLDN5O00501 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.32■□□□□ 0.04
CLDN5O00501 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 AC138627.1-207ENST00000641560 1006 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CLDN5O00501 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
CLDN5O00501 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 AHCYP4-201ENST00000419201 1315 ntBASIC15.32■□□□□ 0.04
CLDN5O00501 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CLDN5O00501 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.32■□□□□ 0.04
CLDN5O00501 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN5O00501 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN5O00501 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN5O00501 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN5O00501 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms