Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 PHBP15-201ENST00000574228 665 ntBASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 MIR3677-201ENST00000578964 60 ntBASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.87□□□□□ -0.03
NEDD8-MDP1E9PL57 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 MYADML-201ENST00000474610 2147 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AC097376.2-205ENST00000610159 5334 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AL583805.1-201ENST00000391389 531 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 RN7SL530P-201ENST00000485097 298 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AL022334.2-201ENST00000610000 484 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 KRT18P9-201ENST00000604826 1300 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 INTS4P1-203ENST00000641008 3683 ntBASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NEDD8-MDP1E9PL57 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
NEDD8-MDP1E9PL57 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms