Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 FAM58BP-201ENST00000439056 645 ntBASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AL645933.1-201ENST00000440087 609 ntBASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 RN7SL769P-201ENST00000469386 295 ntBASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 CHMP4BP1-201ENST00000556017 588 ntBASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 MIR6074-201ENST00000612054 107 ntBASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.79□□□□□ -0.04
RAI2Q9Y5P3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 TMBIM7P-202ENST00000641474 1516 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 KRT8P29-201ENST00000420409 1371 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AL008718.2-201ENST00000609206 1313 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 POM121L10P-201ENST00000436994 1285 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AC012441.2-201ENST00000444843 739 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 SORD2P-201ENST00000558556 1069 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AC027237.1-201ENST00000560942 655 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 AC020914.3-201ENST00000594712 304 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 Z98259.2-201ENST00000641583 609 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI2Q9Y5P3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms