Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN11AQ9UI33 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 BX640514.1-201ENST00000583223 1918 ntBASIC18.17■□□□□ 0.5
SCN11AQ9UI33 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 GGTLC4P-201ENST00000402176 664 ntBASIC18.17■□□□□ 0.5
SCN11AQ9UI33 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 AL512599.1-201ENST00000430724 685 ntBASIC18.17■□□□□ 0.5
SCN11AQ9UI33 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 COQ10BP2-201ENST00000513804 724 ntBASIC18.17■□□□□ 0.5
SCN11AQ9UI33 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 BPIFB5P-201ENST00000457066 1099 ntBASIC18.17■□□□□ 0.5
SCN11AQ9UI33 DNM1P51-201ENST00000558149 522 ntBASIC18.17■□□□□ 0.5
SCN11AQ9UI33 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN11AQ9UI33 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 GOLGA8VP-201ENST00000559009 1798 ntBASIC18.16■□□□□ 0.5
SCN11AQ9UI33 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 AC140479.7-201ENST00000636301 2332 ntBASIC18.16■□□□□ 0.5
SCN11AQ9UI33 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 AL139424.3-202ENST00000641619 917 ntBASIC18.16■□□□□ 0.5
SCN11AQ9UI33 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN11AQ9UI33 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 ACTBP14-201ENST00000411655 1089 ntBASIC18.15■□□□□ 0.5
SCN11AQ9UI33 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AC008026.2-201ENST00000495438 348 ntBASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AC010632.2-201ENST00000588369 1224 ntBASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.15■□□□□ 0.5
SCN11AQ9UI33 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SCN11AQ9UI33 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms