Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.86□□□□□ -0.19
NEUROD4Q9HD90 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC126335.2-201ENST00000623362 4637 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC011498.7-201ENST00000624986 2027 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 FAM8A2P-201ENST00000528813 1142 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 ECM1P1-201ENST00000604092 1279 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AL512343.1-201ENST00000605837 169 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AL022328.1-201ENST00000610050 478 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.85□□□□□ -0.19
NEUROD4Q9HD90 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.84□□□□□ -0.19
NEUROD4Q9HD90 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms