Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 AL596442.2-201ENST00000610240 980 ntBASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 SPDYE12P-201ENST00000618416 771 ntBASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 BX539320.1-201ENST00000623759 877 ntBASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKAP2Q8WWK9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 AC112482.1-201ENST00000492080 688 ntBASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 AL138828.2-201ENST00000615812 383 ntBASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 CICP1-201ENST00000416803 2410 ntBASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms