Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 PGAM1P5-201ENST00000548011 764 ntBASIC16.25■□□□□ 0.19
TRIM50Q86XT4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 MIR5572-201ENST00000583188 137 ntBASIC16.25■□□□□ 0.19
TRIM50Q86XT4 SPCS2P2-201ENST00000603270 608 ntBASIC16.25■□□□□ 0.19
TRIM50Q86XT4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM50Q86XT4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 MPRIPP1-201ENST00000452433 1089 ntBASIC16.24■□□□□ 0.19
TRIM50Q86XT4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 MIR3677-201ENST00000578964 60 ntBASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.24■□□□□ 0.19
TRIM50Q86XT4 MIR6769A-201ENST00000617340 73 ntBASIC16.24■□□□□ 0.19
TRIM50Q86XT4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM50Q86XT4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM50Q86XT4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms