Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PGGT1BP2-201ENST00000398621 1028 ntBASIC9.8□□□□□ -0.84
SCXQ7RTU7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC026954.1-201ENST00000429771 1293 ntBASIC9.8□□□□□ -0.84
SCXQ7RTU7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AL359183.1-201ENST00000623796 2132 ntBASIC9.8□□□□□ -0.84
SCXQ7RTU7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC9.8□□□□□ -0.84
SCXQ7RTU7 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SCXQ7RTU7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 AL139385.1-201ENST00000611744 3272 ntBASIC9.79□□□□□ -0.84
SCXQ7RTU7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SCXQ7RTU7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC9.79□□□□□ -0.84
SCXQ7RTU7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms