Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AL080243.1-201ENST00000423293 1060 ntBASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AL356000.1-201ENST00000441073 1238 ntBASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AC108724.1-201ENST00000481669 352 ntBASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO4Q2I0M5 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 PGAM1P11-201ENST00000416729 680 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 NRADDP-201ENST00000437305 691 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 RN7SL147P-201ENST00000487345 298 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 RN7SL767P-201ENST00000493013 295 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AC004801.1-201ENST00000549557 360 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AC092127.1-201ENST00000567093 3455 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AC073347.1-201ENST00000421633 2643 ntBASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO4Q2I0M5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms