Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.91□□□□□ -0.18
SKP1P63208 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.91□□□□□ -0.18
SKP1P63208 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 AC092658.1-201ENST00000505836 891 ntBASIC13.91□□□□□ -0.18
SKP1P63208 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.91□□□□□ -0.18
SKP1P63208 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.91□□□□□ -0.18
SKP1P63208 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.91□□□□□ -0.18
SKP1P63208 AC005695.3-201ENST00000614522 232 ntBASIC13.91□□□□□ -0.18
SKP1P63208 AP000346.4-201ENST00000614827 381 ntBASIC13.91□□□□□ -0.18
SKP1P63208 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SKP1P63208 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.91□□□□□ -0.18
SKP1P63208 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.91□□□□□ -0.18
SKP1P63208 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 KRT8P28-201ENST00000433288 1390 ntBASIC13.91□□□□□ -0.18
SKP1P63208 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SKP1P63208 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.91□□□□□ -0.18
SKP1P63208 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SKP1P63208 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.91□□□□□ -0.18
SKP1P63208 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 FAM45BP-202ENST00000592932 1624 ntBASIC13.9□□□□□ -0.18
SKP1P63208 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.9□□□□□ -0.18
SKP1P63208 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.9□□□□□ -0.18
SKP1P63208 AC004898.1-201ENST00000451057 766 ntBASIC13.9□□□□□ -0.18
SKP1P63208 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.9□□□□□ -0.18
SKP1P63208 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.9□□□□□ -0.18
SKP1P63208 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.9□□□□□ -0.18
SKP1P63208 RN7SL163P-201ENST00000583100 276 ntBASIC13.9□□□□□ -0.18
SKP1P63208 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.9□□□□□ -0.18
SKP1P63208 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SKP1P63208 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SKP1P63208 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.9□□□□□ -0.18
SKP1P63208 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SKP1P63208 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
SKP1P63208 REXO1L6P-201ENST00000603433 1515 ntBASIC13.9□□□□□ -0.19
SKP1P63208 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SKP1P63208 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms