Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 KRT18P3-201ENST00000451602 1288 ntBASIC14.7□□□□□ -0.06
LSP1P33241 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.7□□□□□ -0.06
LSP1P33241 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LSP1P33241 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.7□□□□□ -0.06
LSP1P33241 LINC01115-203ENST00000606068 577 ntBASIC14.7□□□□□ -0.06
LSP1P33241 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.7□□□□□ -0.06
LSP1P33241 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.7□□□□□ -0.06
LSP1P33241 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.7□□□□□ -0.06
LSP1P33241 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.7□□□□□ -0.06
LSP1P33241 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 LINC02486-201ENST00000604157 3000 ntBASIC14.7□□□□□ -0.06
LSP1P33241 GHET1-201ENST00000627071 1906 ntBASIC14.7□□□□□ -0.06
LSP1P33241 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSP1P33241 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LSP1P33241 AC110048.1-201ENST00000604293 2157 ntBASIC14.7□□□□□ -0.06
LSP1P33241 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LSP1P33241 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.7□□□□□ -0.06
LSP1P33241 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LSP1P33241 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LSP1P33241 PI4KAP2-201ENST00000360806 2080 ntBASIC14.69□□□□□ -0.06
LSP1P33241 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LSP1P33241 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.69□□□□□ -0.06
LSP1P33241 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.69□□□□□ -0.06
LSP1P33241 AC007967.2-201ENST00000432613 625 ntBASIC14.69□□□□□ -0.06
LSP1P33241 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.69□□□□□ -0.06
LSP1P33241 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.69□□□□□ -0.06
LSP1P33241 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 AC079140.1-201ENST00000508039 487 ntBASIC14.69□□□□□ -0.06
LSP1P33241 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.69□□□□□ -0.06
LSP1P33241 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.69□□□□□ -0.06
LSP1P33241 BAP1-211ENST00000615113 489 ntBASIC14.69□□□□□ -0.06
LSP1P33241 AL513190.1-201ENST00000621254 727 ntBASIC14.69□□□□□ -0.06
LSP1P33241 LINC00628-201ENST00000628516 1289 ntBASIC14.69□□□□□ -0.06
LSP1P33241 SALL4P5-201ENST00000419001 1760 ntBASIC14.69□□□□□ -0.06
LSP1P33241 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LSP1P33241 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.69□□□□□ -0.06
LSP1P33241 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.69□□□□□ -0.06
LSP1P33241 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSP1P33241 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.68□□□□□ -0.06
LSP1P33241 MRPL37P1-201ENST00000592451 1337 ntBASIC14.68□□□□□ -0.06
LSP1P33241 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 UXT-AS1-201ENST00000590504 1525 ntBASIC14.68□□□□□ -0.06
LSP1P33241 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LSP1P33241 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LSP1P33241 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.68□□□□□ -0.06
LSP1P33241 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms