Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 FKBP4P8-201ENST00000610931 1369 ntBASIC17.72■□□□□ 0.43
TM4SF1P30408 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TM4SF1P30408 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.72■□□□□ 0.43
TM4SF1P30408 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.72■□□□□ 0.43
TM4SF1P30408 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.72■□□□□ 0.43
TM4SF1P30408 AC018846.1-201ENST00000568231 183 ntBASIC17.72■□□□□ 0.43
TM4SF1P30408 AC005274.1-201ENST00000623460 802 ntBASIC17.72■□□□□ 0.43
TM4SF1P30408 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TM4SF1P30408 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.72■□□□□ 0.43
TM4SF1P30408 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.72■□□□□ 0.43
TM4SF1P30408 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.72■□□□□ 0.43
TM4SF1P30408 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM4SF1P30408 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TM4SF1P30408 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TM4SF1P30408 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AP000244.1-201ENST00000424582 201 ntBASIC17.71■□□□□ 0.43
TM4SF1P30408 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AL512599.1-201ENST00000430724 685 ntBASIC17.71■□□□□ 0.43
TM4SF1P30408 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.71■□□□□ 0.43
TM4SF1P30408 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AC023906.1-201ENST00000486386 453 ntBASIC17.71■□□□□ 0.43
TM4SF1P30408 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.71■□□□□ 0.43
TM4SF1P30408 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.71■□□□□ 0.43
TM4SF1P30408 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.71■□□□□ 0.43
TM4SF1P30408 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
TM4SF1P30408 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 AC117503.4-201ENST00000623229 1418 ntBASIC17.71■□□□□ 0.43
TM4SF1P30408 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.71■□□□□ 0.43
TM4SF1P30408 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
TM4SF1P30408 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM4SF1P30408 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TM4SF1P30408 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.7■□□□□ 0.42
TM4SF1P30408 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF1P30408 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.7■□□□□ 0.42
TM4SF1P30408 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TM4SF1P30408 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF1P30408 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TM4SF1P30408 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TM4SF1P30408 RPL3P2-204ENST00000413027 1203 ntBASIC17.7■□□□□ 0.42
TM4SF1P30408 PGAM1P11-201ENST00000416729 680 ntBASIC17.7■□□□□ 0.42
TM4SF1P30408 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.7■□□□□ 0.42
TM4SF1P30408 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.7■□□□□ 0.42
TM4SF1P30408 RN7SL147P-201ENST00000487345 298 ntBASIC17.7■□□□□ 0.42
TM4SF1P30408 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.7■□□□□ 0.42
TM4SF1P30408 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms