Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.77□□□□□ -0.05
HLA-DPA1P20036 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 AC100850.1-201ENST00000506768 649 ntBASIC14.77□□□□□ -0.05
HLA-DPA1P20036 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPA1P20036 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 AC011498.7-201ENST00000624986 2027 ntBASIC14.76□□□□□ -0.05
HLA-DPA1P20036 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.76□□□□□ -0.05
HLA-DPA1P20036 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 FAM21FP-201ENST00000426241 1131 ntBASIC14.76□□□□□ -0.05
HLA-DPA1P20036 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.76□□□□□ -0.05
HLA-DPA1P20036 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 AC009955.4-201ENST00000597192 544 ntBASIC14.76□□□□□ -0.05
HLA-DPA1P20036 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 AC020910.6-201ENST00000623084 1459 ntBASIC14.76□□□□□ -0.05
HLA-DPA1P20036 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DPA1P20036 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 E2F3P2-201ENST00000447755 1422 ntBASIC14.75□□□□□ -0.05
HLA-DPA1P20036 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SNX18-202ENST00000343017 3140 ntBASIC14.75□□□□□ -0.05
HLA-DPA1P20036 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPA1P20036 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms