Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TCAF2P1-201ENST00000291129 2421 ntBASIC13.66□□□□□ -0.22
CCL4P13236 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CCL4P13236 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 LAP3P2-201ENST00000454686 1454 ntBASIC13.66□□□□□ -0.22
CCL4P13236 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCL4P13236 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCL4P13236 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CCL4P13236 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCL4P13236 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL4P13236 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CCL4P13236 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 AL512306.1-201ENST00000432698 848 ntBASIC13.65□□□□□ -0.22
CCL4P13236 AC092638.2-201ENST00000441105 947 ntBASIC13.65□□□□□ -0.22
CCL4P13236 ERP29P1-201ENST00000442902 706 ntBASIC13.65□□□□□ -0.22
CCL4P13236 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 AC005586.2-201ENST00000563946 837 ntBASIC13.65□□□□□ -0.22
CCL4P13236 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL4P13236 AP000322.3-201ENST00000608665 388 ntBASIC13.65□□□□□ -0.22
CCL4P13236 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCL4P13236 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL4P13236 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL4P13236 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL4P13236 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CCL4P13236 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.65□□□□□ -0.23
CCL4P13236 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL4P13236 AC006372.4-201ENST00000624122 1543 ntBASIC13.64□□□□□ -0.23
CCL4P13236 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 DBET-201ENST00000630918 3363 ntBASIC13.64□□□□□ -0.23
CCL4P13236 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL4P13236 AGGF1P1-201ENST00000509500 2073 ntBASIC13.64□□□□□ -0.23
CCL4P13236 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL4P13236 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL4P13236 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL4P13236 DPY19L2P5-201ENST00000456300 331 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms