Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH1P12830 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH1P12830 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH1P12830 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH1P12830 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.31□□□□□ -0.12
CDH1P12830 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH1P12830 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.31□□□□□ -0.12
CDH1P12830 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.31□□□□□ -0.12
CDH1P12830 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH1P12830 AC239800.4-201ENST00000603712 296 ntBASIC14.31□□□□□ -0.12
CDH1P12830 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH1P12830 MIR6775-201ENST00000617557 69 ntBASIC14.31□□□□□ -0.12
CDH1P12830 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH1P12830 AC089987.1-201ENST00000551654 2209 ntBASIC14.31□□□□□ -0.12
CDH1P12830 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH1P12830 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH1P12830 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 KRT8P4-201ENST00000509735 1454 ntBASIC14.31□□□□□ -0.12
CDH1P12830 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CDH1P12830 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH1P12830 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH1P12830 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH1P12830 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 AC002472.3-201ENST00000640124 621 ntBASIC14.3□□□□□ -0.12
CDH1P12830 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 COL6A4P2-202ENST00000504443 2753 ntBASIC14.3□□□□□ -0.12
CDH1P12830 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CDH1P12830 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH1P12830 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH1P12830 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH1P12830 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH1P12830 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH1P12830 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH1P12830 AGGF1P1-201ENST00000509500 2073 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms