Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
EPB41P11171 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.08■□□□□ 0.16
EPB41P11171 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
EPB41P11171 SORD2P-201ENST00000558556 1069 ntBASIC16.08■□□□□ 0.16
EPB41P11171 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.08■□□□□ 0.16
EPB41P11171 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.08■□□□□ 0.16
EPB41P11171 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 AHCYP2-201ENST00000430630 1300 ntBASIC16.08■□□□□ 0.16
EPB41P11171 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
EPB41P11171 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.08■□□□□ 0.16
EPB41P11171 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.08■□□□□ 0.16
EPB41P11171 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.08■□□□□ 0.16
EPB41P11171 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EPB41P11171 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CROCCP4-201ENST00000457096 498 ntBASIC16.07■□□□□ 0.16
EPB41P11171 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.07■□□□□ 0.16
EPB41P11171 AP000812.2-201ENST00000538934 718 ntBASIC16.07■□□□□ 0.16
EPB41P11171 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 ZACNP1-201ENST00000612259 710 ntBASIC16.07■□□□□ 0.16
EPB41P11171 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 KRT8P4-201ENST00000509735 1454 ntBASIC16.07■□□□□ 0.16
EPB41P11171 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 PDIA3P1-201ENST00000471856 1510 ntBASIC16.07■□□□□ 0.16
EPB41P11171 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 CICP17-201ENST00000418553 2377 ntBASIC16.07■□□□□ 0.16
EPB41P11171 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.07■□□□□ 0.16
EPB41P11171 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
EPB41P11171 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.07■□□□□ 0.16
EPB41P11171 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 AC020910.6-201ENST00000623084 1459 ntBASIC16.06■□□□□ 0.16
EPB41P11171 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 KRT8P28-201ENST00000433288 1390 ntBASIC16.06■□□□□ 0.16
EPB41P11171 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 BOLA2P3-201ENST00000404566 256 ntBASIC16.06■□□□□ 0.16
EPB41P11171 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.06■□□□□ 0.16
EPB41P11171 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.06■□□□□ 0.16
EPB41P11171 RPL7P3-201ENST00000441388 714 ntBASIC16.06■□□□□ 0.16
EPB41P11171 AL355994.2-201ENST00000447882 704 ntBASIC16.06■□□□□ 0.16
EPB41P11171 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms