Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AC051619.7-201ENST00000568314 623 ntBASIC13.37□□□□□ -0.27
HTR1AP08908 MIR3687-2-201ENST00000577708 61 ntBASIC13.37□□□□□ -0.27
HTR1AP08908 MIR3687-1-201ENST00000614492 61 ntBASIC13.37□□□□□ -0.27
HTR1AP08908 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HTR1AP08908 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
HTR1AP08908 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.37□□□□□ -0.27
HTR1AP08908 AL109936.8-201ENST00000641772 604 ntBASIC13.37□□□□□ -0.27
HTR1AP08908 AL158070.2-201ENST00000623713 1621 ntBASIC13.37□□□□□ -0.27
HTR1AP08908 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HTR1AP08908 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.37□□□□□ -0.27
HTR1AP08908 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1AP08908 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HTR1AP08908 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1AP08908 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1AP08908 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1AP08908 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1AP08908 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1AP08908 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1AP08908 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1AP08908 HLA-V-204ENST00000476601 1289 ntBASIC13.36□□□□□ -0.27
HTR1AP08908 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1AP08908 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1AP08908 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HTR1AP08908 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 AC004461.2-201ENST00000629517 803 ntBASIC13.36□□□□□ -0.27
HTR1AP08908 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1AP08908 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
HTR1AP08908 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1AP08908 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1AP08908 AP003969.2-201ENST00000623739 2275 ntBASIC13.36□□□□□ -0.27
HTR1AP08908 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1AP08908 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1AP08908 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR1AP08908 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR1AP08908 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HTR1AP08908 AL022323.5-201ENST00000624101 2059 ntBASIC13.35□□□□□ -0.27
HTR1AP08908 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1AP08908 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1AP08908 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
HTR1AP08908 AL355102.3-201ENST00000554299 1678 ntBASIC13.35□□□□□ -0.27
HTR1AP08908 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1AP08908 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms