Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
APOC1P02654 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC1P02654 AC098850.1-201ENST00000419919 790 ntBASIC13.03□□□□□ -0.32
APOC1P02654 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC1P02654 API5-211ENST00000534695 560 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC1P02654 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC1P02654 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC1P02654 AC027796.2-201ENST00000575326 344 ntBASIC13.03□□□□□ -0.32
APOC1P02654 CHCHD2P3-201ENST00000603038 451 ntBASIC13.03□□□□□ -0.32
APOC1P02654 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 MIR6074-201ENST00000612054 107 ntBASIC13.03□□□□□ -0.32
APOC1P02654 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 AL033527.5-201ENST00000641382 801 ntBASIC13.03□□□□□ -0.32
APOC1P02654 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 MRPL37P1-201ENST00000592451 1337 ntBASIC13.03□□□□□ -0.32
APOC1P02654 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 AL136172.1-201ENST00000598590 1394 ntBASIC13.03□□□□□ -0.32
APOC1P02654 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC1P02654 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 AC003102.2-201ENST00000589195 1469 ntBASIC13.03□□□□□ -0.32
APOC1P02654 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOC1P02654 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC1P02654 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
APOC1P02654 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC1P02654 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
APOC1P02654 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC1P02654 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC1P02654 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 AC093433.1-201ENST00000458048 571 ntBASIC13.02□□□□□ -0.33
APOC1P02654 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 PTP4A1P2-201ENST00000546033 454 ntBASIC13.02□□□□□ -0.33
APOC1P02654 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
APOC1P02654 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 CLUHP6-201ENST00000580789 941 ntBASIC13.02□□□□□ -0.33
APOC1P02654 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.02□□□□□ -0.33
APOC1P02654 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.02□□□□□ -0.33
APOC1P02654 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
APOC1P02654 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOC1P02654 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APOC1P02654 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC1P02654 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOC1P02654 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC1P02654 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC1P02654 HSPA7-201ENST00000445535 1927 ntBASIC13.01□□□□□ -0.33
APOC1P02654 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
APOC1P02654 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms