Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN6O15212 AC006453.4-201ENST00000636949 1252 ntBASIC14.72□□□□□ -0.05
PFDN6O15212 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN6O15212 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PFDN6O15212 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.72□□□□□ -0.05
PFDN6O15212 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN6O15212 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN6O15212 AC139712.1-201ENST00000378256 1875 ntBASIC14.72□□□□□ -0.05
PFDN6O15212 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN6O15212 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 FTH1P14-201ENST00000482930 551 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN6O15212 AC132938.2-201ENST00000579188 680 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PFDN6O15212 OR10B1P-201ENST00000601666 907 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 AC008825.2-201ENST00000603374 718 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN6O15212 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN6O15212 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 AC138951.2-201ENST00000623455 1161 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 AL591163.1-201ENST00000641757 987 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN6O15212 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN6O15212 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 AC020910.5-201ENST00000623668 1865 ntBASIC14.71□□□□□ -0.05
PFDN6O15212 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN6O15212 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.71□□□□□ -0.06
PFDN6O15212 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
PFDN6O15212 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.71□□□□□ -0.06
PFDN6O15212 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN6O15212 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.7□□□□□ -0.06
PFDN6O15212 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.7□□□□□ -0.06
PFDN6O15212 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN6O15212 BOLA2P3-201ENST00000404566 256 ntBASIC14.7□□□□□ -0.06
PFDN6O15212 NME2P1-201ENST00000426182 414 ntBASIC14.7□□□□□ -0.06
PFDN6O15212 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN6O15212 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms