Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC28A1O00337 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SLC28A1O00337 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC28A1O00337 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC28A1O00337 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC28A1O00337 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC28A1O00337 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC28A1O00337 AC005586.2-201ENST00000563946 837 ntBASIC14.1□□□□□ -0.15
SLC28A1O00337 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC28A1O00337 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SLC28A1O00337 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.1□□□□□ -0.15
SLC28A1O00337 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 AC092053.3-201ENST00000641308 4975 ntBASIC14.1□□□□□ -0.15
SLC28A1O00337 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SLC28A1O00337 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SLC28A1O00337 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC28A1O00337 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 AC089987.1-201ENST00000551654 2209 ntBASIC14.1□□□□□ -0.15
SLC28A1O00337 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC28A1O00337 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC28A1O00337 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SLC28A1O00337 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 KRT8P28-201ENST00000433288 1390 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC28A1O00337 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SLC28A1O00337 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SLC28A1O00337 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC004945.1-201ENST00000416738 983 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 TERF1P3-201ENST00000505638 1227 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC28A1O00337 AP001889.1-201ENST00000525414 633 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC28A1O00337 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC025279.2-201ENST00000569730 653 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC002472.3-201ENST00000640124 621 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC28A1O00337 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SLC28A1O00337 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC131212.3-201ENST00000624087 4219 ntBASIC14.09□□□□□ -0.15
SLC28A1O00337 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC28A1O00337 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC28A1O00337 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC28A1O00337 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms