Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 AC087386.2-201ENST00000623212 4637 ntBASIC15.22■□□□□ 0.03
SRRM3A6NNA2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 SPDYE17-201ENST00000412399 783 ntBASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RPL17P11-201ENST00000417593 544 ntBASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 AC026954.1-201ENST00000429771 1293 ntBASIC15.22■□□□□ 0.03
SRRM3A6NNA2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RN7SL769P-201ENST00000469386 295 ntBASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRRM3A6NNA2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 AC138028.6-201ENST00000616106 1482 ntBASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 SCARNA20.5-201ENST00000516991 142 ntBASIC15.21■□□□□ 0.03
SRRM3A6NNA2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 PTP4A1P2-201ENST00000546033 454 ntBASIC15.21■□□□□ 0.03
SRRM3A6NNA2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.21■□□□□ 0.03
SRRM3A6NNA2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC15.21■□□□□ 0.02
SRRM3A6NNA2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms