Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.83■□□□□ 0.28
ARID3AQ99856 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.83■□□□□ 0.28
ARID3AQ99856 RNA5SP421-201ENST00000516864 134 ntBASIC16.83■□□□□ 0.28
ARID3AQ99856 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.83■□□□□ 0.28
ARID3AQ99856 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ARID3AQ99856 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.83■□□□□ 0.28
ARID3AQ99856 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ARID3AQ99856 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.83■□□□□ 0.28
ARID3AQ99856 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.83■□□□□ 0.28
ARID3AQ99856 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.83■□□□□ 0.28
ARID3AQ99856 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.83■□□□□ 0.28
ARID3AQ99856 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.83■□□□□ 0.28
ARID3AQ99856 AL096865.1-201ENST00000606796 927 ntBASIC16.83■□□□□ 0.28
ARID3AQ99856 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.83■□□□□ 0.28
ARID3AQ99856 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.83■□□□□ 0.28
ARID3AQ99856 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.83■□□□□ 0.28
ARID3AQ99856 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ARID3AQ99856 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARID3AQ99856 OS9-206ENST00000435406 2346 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.82■□□□□ 0.28
ARID3AQ99856 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 AL359881.3-201ENST00000602640 1721 ntBASIC16.82■□□□□ 0.28
ARID3AQ99856 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
ARID3AQ99856 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.82■□□□□ 0.28
ARID3AQ99856 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.82■□□□□ 0.28
ARID3AQ99856 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ARID3AQ99856 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.82■□□□□ 0.28
ARID3AQ99856 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARID3AQ99856 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.81■□□□□ 0.28
ARID3AQ99856 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 BTBD7P1-201ENST00000447253 1453 ntBASIC16.81■□□□□ 0.28
ARID3AQ99856 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms