Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AC093726.1-201ENST00000608064 963 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 C1QBPP1-201ENST00000400117 770 ntBASIC13.43□□□□□ -0.26
SNX18Q96RF0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 RN7SL752P-201ENST00000463779 287 ntBASIC13.43□□□□□ -0.26
SNX18Q96RF0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 GIMAP3P-201ENST00000495150 836 ntBASIC13.43□□□□□ -0.26
SNX18Q96RF0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC124283.3-201ENST00000570869 594 ntBASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNX18Q96RF0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SNX18Q96RF0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 AC004241.5-201ENST00000623870 2448 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms