Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNGAP1Q96PV0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SYNGAP1Q96PV0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNGAP1Q96PV0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNGAP1Q96PV0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNGAP1Q96PV0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SYNGAP1Q96PV0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 OR2R1P-201ENST00000441404 914 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 RPSAP15-201ENST00000448168 861 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 DUTP3-201ENST00000450025 415 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 KRT18P66-201ENST00000452970 1269 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 NDUFS6P1-201ENST00000485187 316 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 MIR6756-201ENST00000616240 63 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 KRT8P31-201ENST00000504812 1408 ntBASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNGAP1Q96PV0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 RNA5SP359-201ENST00000364838 113 ntBASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AL512430.1-201ENST00000392575 860 ntBASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 SIGLEC18P-201ENST00000602271 909 ntBASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AC007881.3-201ENST00000608897 607 ntBASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SYNGAP1Q96PV0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 AC106881.1-201ENST00000605849 3329 ntBASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.54■□□□□ 0.24
SYNGAP1Q96PV0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms