Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBE2D3P61077 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBE2D3P61077 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 EIF3FP3-201ENST00000434851 1086 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 INGX-202ENST00000489074 768 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
UBE2D3P61077 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 RFPL4AP1-201ENST00000530883 850 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 AC123567.1-201ENST00000548294 1261 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2D3P61077 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 AC133539.2-201ENST00000604757 467 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 TMEM261P1-201ENST00000604899 340 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.49□□□□□ -0.73
UBE2D3P61077 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBE2D3P61077 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.49□□□□□ -0.73
UBE2D3P61077 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2D3P61077 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
UBE2D3P61077 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2D3P61077 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D3P61077 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D3P61077 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D3P61077 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms