Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
WNT3AP56704 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.78□□□□□ -0.04
WNT3AP56704 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.78□□□□□ -0.04
WNT3AP56704 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 CICP16-201ENST00000502609 2813 ntBASIC14.78□□□□□ -0.04
WNT3AP56704 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.78□□□□□ -0.04
WNT3AP56704 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.78□□□□□ -0.04
WNT3AP56704 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.78□□□□□ -0.04
WNT3AP56704 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
WNT3AP56704 AC244394.1-201ENST00000435000 1665 ntBASIC14.77□□□□□ -0.04
WNT3AP56704 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
WNT3AP56704 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
WNT3AP56704 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.77□□□□□ -0.04
WNT3AP56704 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.77□□□□□ -0.04
WNT3AP56704 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
WNT3AP56704 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.77□□□□□ -0.04
WNT3AP56704 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.77□□□□□ -0.04
WNT3AP56704 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.77□□□□□ -0.04
WNT3AP56704 AC064801.2-201ENST00000625052 1303 ntBASIC14.77□□□□□ -0.04
WNT3AP56704 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
WNT3AP56704 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
WNT3AP56704 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.77□□□□□ -0.05
WNT3AP56704 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 AL161932.2-201ENST00000435436 679 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 AL645933.1-201ENST00000440087 609 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 ATP5G2P4-201ENST00000442175 420 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 AC005586.2-201ENST00000563946 837 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 MIR6720-201ENST00000611664 98 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 AC009542.2-202ENST00000619004 1067 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 SBF1P1-201ENST00000444527 5631 ntBASIC14.77□□□□□ -0.05
WNT3AP56704 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.77□□□□□ -0.05
WNT3AP56704 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.77□□□□□ -0.05
WNT3AP56704 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
WNT3AP56704 TMBIM7P-202ENST00000641474 1516 ntBASIC14.76□□□□□ -0.05
WNT3AP56704 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
WNT3AP56704 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
WNT3AP56704 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
WNT3AP56704 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.76□□□□□ -0.05
WNT3AP56704 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
WNT3AP56704 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.76□□□□□ -0.05
WNT3AP56704 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
WNT3AP56704 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
WNT3AP56704 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
WNT3AP56704 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
WNT3AP56704 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
WNT3AP56704 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
WNT3AP56704 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms