Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 AL136379.1-201ENST00000623471 2642 ntBASIC15.28■□□□□ 0.04
CLCN4P51793 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.28■□□□□ 0.04
CLCN4P51793 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLCN4P51793 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 KRT18P66-201ENST00000452970 1269 ntBASIC15.28■□□□□ 0.04
CLCN4P51793 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN4P51793 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN4P51793 AP000911.2-201ENST00000534330 502 ntBASIC15.28■□□□□ 0.04
CLCN4P51793 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN4P51793 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CLCN4P51793 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLCN4P51793 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN4P51793 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN4P51793 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN4P51793 AC090502.4-201ENST00000551714 1386 ntBASIC15.27■□□□□ 0.04
CLCN4P51793 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN4P51793 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN4P51793 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLCN4P51793 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN4P51793 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCN4P51793 AL354861.1-201ENST00000445213 355 ntBASIC15.27■□□□□ 0.04
CLCN4P51793 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN4P51793 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN4P51793 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN4P51793 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN4P51793 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCN4P51793 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN4P51793 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLCN4P51793 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CLCN4P51793 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLCN4P51793 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN4P51793 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLCN4P51793 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.27■□□□□ 0.03
CLCN4P51793 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
CLCN4P51793 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCN4P51793 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLCN4P51793 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CLCN4P51793 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCN4P51793 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLCN4P51793 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 AC067930.6-201ENST00000623257 4947 ntBASIC15.26■□□□□ 0.03
CLCN4P51793 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms