Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
ATP6V0CP27449 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.74□□□□□ -0.53
ATP6V0CP27449 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 TNRC18P1-201ENST00000502875 3650 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 YBX2P1-201ENST00000394192 760 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 SALL4P5-201ENST00000419001 1760 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 MARK2P9-201ENST00000430958 1727 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 AC079781.3-201ENST00000449110 356 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 TIMM8BP1-201ENST00000452384 211 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 AC009474.1-201ENST00000455096 1565 ntBASIC11.73□□□□□ -0.53
ATP6V0CP27449 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.73□□□□□ -0.53
ATP6V0CP27449 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ATP6V0CP27449 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
ATP6V0CP27449 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 AL035456.1-201ENST00000456064 1369 ntBASIC11.72□□□□□ -0.53
ATP6V0CP27449 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 MRPL37P1-201ENST00000592451 1337 ntBASIC11.72□□□□□ -0.53
ATP6V0CP27449 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ATP6V0CP27449 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms