Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LAMA1P25391 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
LAMA1P25391 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LAMA1P25391 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LAMA1P25391 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LAMA1P25391 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LAMA1P25391 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.89□□□□□ -0.19
LAMA1P25391 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.89□□□□□ -0.19
LAMA1P25391 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.89□□□□□ -0.19
LAMA1P25391 IGHEP1-201ENST00000521393 651 ntBASIC13.89□□□□□ -0.19
LAMA1P25391 CES1P2-201ENST00000566467 1242 ntBASIC13.89□□□□□ -0.19
LAMA1P25391 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LAMA1P25391 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LAMA1P25391 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LAMA1P25391 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.89□□□□□ -0.19
LAMA1P25391 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
LAMA1P25391 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LAMA1P25391 FKBP4P8-201ENST00000610931 1369 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LAMA1P25391 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.88□□□□□ -0.19
LAMA1P25391 AC020904.3-201ENST00000624199 442 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.88□□□□□ -0.19
LAMA1P25391 AC215219.1-201ENST00000400706 1817 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LAMA1P25391 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 ODCP-201ENST00000459650 1639 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LAMA1P25391 KRT18P4-201ENST00000422599 1288 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC13.88□□□□□ -0.19
LAMA1P25391 RN7SL147P-201ENST00000487345 298 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 AC233280.19-201ENST00000633223 136 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LAMA1P25391 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
LAMA1P25391 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.88□□□□□ -0.19
LAMA1P25391 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LAMA1P25391 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.87□□□□□ -0.19
LAMA1P25391 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 EGLN3-205ENST00000547327 2849 ntBASIC13.87□□□□□ -0.19
LAMA1P25391 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.87□□□□□ -0.19
LAMA1P25391 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 AC022080.1-201ENST00000366255 781 ntBASIC13.87□□□□□ -0.19
LAMA1P25391 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.87□□□□□ -0.19
LAMA1P25391 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.87□□□□□ -0.19
LAMA1P25391 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LAMA1P25391 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
LAMA1P25391 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LAMA1P25391 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.87□□□□□ -0.19
LAMA1P25391 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms