Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 AC126335.2-201ENST00000623362 4637 ntBASIC14.81□□□□□ -0.04
VCLP18206 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.81□□□□□ -0.04
VCLP18206 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.81□□□□□ -0.04
VCLP18206 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VCLP18206 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.8□□□□□ -0.04
VCLP18206 MIR1202-201ENST00000408529 83 ntBASIC14.8□□□□□ -0.04
VCLP18206 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 RPS2P32-201ENST00000439199 892 ntBASIC14.8□□□□□ -0.04
VCLP18206 AC119751.2-201ENST00000504529 210 ntBASIC14.8□□□□□ -0.04
VCLP18206 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.8□□□□□ -0.04
VCLP18206 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VCLP18206 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VCLP18206 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 AC152010.1-201ENST00000415779 2006 ntBASIC14.8□□□□□ -0.04
VCLP18206 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 AC011474.4-201ENST00000623523 2076 ntBASIC14.8□□□□□ -0.04
VCLP18206 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VCLP18206 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
VCLP18206 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VCLP18206 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCLP18206 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.79□□□□□ -0.04
VCLP18206 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.79□□□□□ -0.04
VCLP18206 AC099336.1-201ENST00000417053 1171 ntBASIC14.79□□□□□ -0.04
VCLP18206 POM121L8P-201ENST00000417732 1281 ntBASIC14.79□□□□□ -0.04
VCLP18206 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.79□□□□□ -0.04
VCLP18206 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.79□□□□□ -0.04
VCLP18206 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
VCLP18206 POM121L9P-203ENST00000441984 1285 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms