Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 AL133338.1-201ENST00000565695 1517 ntBASIC17.2■□□□□ 0.34
TOP1P11387 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 CICP4-201ENST00000447359 2812 ntBASIC17.2■□□□□ 0.34
TOP1P11387 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.2■□□□□ 0.34
TOP1P11387 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.2■□□□□ 0.34
TOP1P11387 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TOP1P11387 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 MBLAC2-202ENST00000514906 1936 ntBASIC17.19■□□□□ 0.34
TOP1P11387 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP1P11387 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TOP1P11387 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP1P11387 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.19■□□□□ 0.34
TOP1P11387 CALR4P-201ENST00000431943 946 ntBASIC17.19■□□□□ 0.34
TOP1P11387 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.19■□□□□ 0.34
TOP1P11387 EIF4HP1-201ENST00000453115 687 ntBASIC17.19■□□□□ 0.34
TOP1P11387 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TOP1P11387 HLA-J-204ENST00000495278 958 ntBASIC17.19■□□□□ 0.34
TOP1P11387 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 AL160314.3-201ENST00000556041 767 ntBASIC17.19■□□□□ 0.34
TOP1P11387 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 AC008805.1-201ENST00000590892 364 ntBASIC17.19■□□□□ 0.34
TOP1P11387 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 AC090164.2-201ENST00000611487 516 ntBASIC17.19■□□□□ 0.34
TOP1P11387 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.19■□□□□ 0.34
TOP1P11387 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.19■□□□□ 0.34
TOP1P11387 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 AC009093.10-201ENST00000641956 1442 ntBASIC17.19■□□□□ 0.34
TOP1P11387 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TOP1P11387 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 AC015688.4-201ENST00000580780 1647 ntBASIC17.18■□□□□ 0.34
TOP1P11387 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 KHSRPP1-201ENST00000427983 1768 ntBASIC17.18■□□□□ 0.34
TOP1P11387 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
TOP1P11387 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOP1P11387 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP1P11387 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.18■□□□□ 0.34
TOP1P11387 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TOP1P11387 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TOP1P11387 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.18■□□□□ 0.34
TOP1P11387 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.18■□□□□ 0.34
TOP1P11387 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP1P11387 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.18■□□□□ 0.34
TOP1P11387 AL136295.7-201ENST00000619226 1200 ntBASIC17.18■□□□□ 0.34
TOP1P11387 AL139099.5-201ENST00000635274 300 ntBASIC17.18■□□□□ 0.34
TOP1P11387 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.18■□□□□ 0.34
TOP1P11387 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOP1P11387 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TOP1P11387 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TOP1P11387 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 MTHFR-210ENST00000641407 2387 ntBASIC17.17■□□□□ 0.34
TOP1P11387 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TOP1P11387 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TOP1P11387 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms