Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CSPG5O95196 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CSPG5O95196 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CSPG5O95196 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.75■□□□□ 0.11
CSPG5O95196 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSPG5O95196 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.75■□□□□ 0.11
CSPG5O95196 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 AL138725.1-201ENST00000407347 1314 ntBASIC15.74■□□□□ 0.11
CSPG5O95196 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.74■□□□□ 0.11
CSPG5O95196 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.74■□□□□ 0.11
CSPG5O95196 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.74■□□□□ 0.11
CSPG5O95196 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.74■□□□□ 0.11
CSPG5O95196 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 AP000358.1-201ENST00000456260 156 ntBASIC15.74■□□□□ 0.11
CSPG5O95196 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CSPG5O95196 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 AC107464.3-201ENST00000609172 737 ntBASIC15.74■□□□□ 0.11
CSPG5O95196 LINC01783-202ENST00000614408 828 ntBASIC15.74■□□□□ 0.11
CSPG5O95196 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CSPG5O95196 BX284668.2-205ENST00000619677 828 ntBASIC15.74■□□□□ 0.11
CSPG5O95196 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.74■□□□□ 0.11
CSPG5O95196 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSPG5O95196 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
CSPG5O95196 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.74■□□□□ 0.11
CSPG5O95196 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CSPG5O95196 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 AL592076.1-201ENST00000424448 303 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 AC097065.1-201ENST00000425737 517 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.73■□□□□ 0.11
CSPG5O95196 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.73■□□□□ 0.11
CSPG5O95196 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 MIR3180-2-201ENST00000581748 88 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 AC007326.1-201ENST00000604539 458 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 AC127024.7-201ENST00000625101 200 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 CYP4F23P-201ENST00000593402 1579 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CSPG5O95196 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 AC144522.1-201ENST00000625111 1658 ntBASIC15.73■□□□□ 0.11
CSPG5O95196 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms