Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.17□□□□□ -0.14
SEC22BO75396 BCRP1-201ENST00000444246 691 ntBASIC14.17□□□□□ -0.14
SEC22BO75396 AC012441.1-201ENST00000446669 685 ntBASIC14.17□□□□□ -0.14
SEC22BO75396 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.17□□□□□ -0.14
SEC22BO75396 FTLP10-202ENST00000505798 471 ntBASIC14.17□□□□□ -0.14
SEC22BO75396 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.17□□□□□ -0.14
SEC22BO75396 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 PTP4A1P2-201ENST00000546033 454 ntBASIC14.17□□□□□ -0.14
SEC22BO75396 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.17□□□□□ -0.14
SEC22BO75396 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.17□□□□□ -0.14
SEC22BO75396 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 HSPA8P5-201ENST00000456928 2069 ntBASIC14.17□□□□□ -0.14
SEC22BO75396 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SEC22BO75396 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 KRT8P24-201ENST00000560290 1559 ntBASIC14.17□□□□□ -0.14
SEC22BO75396 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SEC22BO75396 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SEC22BO75396 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC22BO75396 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.16□□□□□ -0.14
SEC22BO75396 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC22BO75396 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC22BO75396 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SEC22BO75396 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.16□□□□□ -0.14
SEC22BO75396 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 DGCR5-201ENST00000399539 862 ntBASIC14.16□□□□□ -0.14
SEC22BO75396 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC22BO75396 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.16□□□□□ -0.14
SEC22BO75396 ACTG1P3-201ENST00000431775 1114 ntBASIC14.16□□□□□ -0.14
SEC22BO75396 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 TDH-203ENST00000531764 1110 ntBASIC14.16□□□□□ -0.14
SEC22BO75396 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
SEC22BO75396 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.16□□□□□ -0.14
SEC22BO75396 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 AC190387.1-201ENST00000551683 408 ntBASIC14.16□□□□□ -0.14
SEC22BO75396 TP53TG3HP-202ENST00000569755 579 ntBASIC14.16□□□□□ -0.14
SEC22BO75396 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SEC22BO75396 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.16□□□□□ -0.14
SEC22BO75396 BX088702.1-201ENST00000610784 235 ntBASIC14.16□□□□□ -0.14
SEC22BO75396 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SEC22BO75396 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
SEC22BO75396 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC22BO75396 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SEC22BO75396 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SEC22BO75396 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SEC22BO75396 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC22BO75396 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC22BO75396 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SEC22BO75396 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SEC22BO75396 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.15□□□□□ -0.14
SEC22BO75396 KHSRPP1-201ENST00000427983 1768 ntBASIC14.15□□□□□ -0.14
SEC22BO75396 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SEC22BO75396 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SEC22BO75396 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.15□□□□□ -0.14
SEC22BO75396 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC22BO75396 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SEC22BO75396 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms