Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 AC018629.1-201ENST00000623381 1736 ntBASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AC006335.1-201ENST00000445200 547 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AL596276.2-201ENST00000447525 331 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 RN7SL720P-201ENST00000488178 304 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 FGFR3P5-201ENST00000564496 886 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AL157813.1-201ENST00000612996 587 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AC092299.1-201ENST00000632679 757 ntBASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00588Q9Y4M8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 MTHFR-210ENST00000641407 2387 ntBASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 OR2I1P-210ENST00000642037 4691 ntBASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 XBP1P1-201ENST00000436573 652 ntBASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 RN7SL769P-201ENST00000469386 295 ntBASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 IMP3P2-201ENST00000489760 475 ntBASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LINC00588Q9Y4M8 AC105129.2-201ENST00000559536 390 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms