Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 ZNF259P1-201ENST00000407656 1365 ntBASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.45□□□□□ -0.26
ERGIC3Q9Y282 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AC011840.2-201ENST00000563063 1520 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AC107375.1-201ENST00000564464 2231 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 DNM1P41-201ENST00000623634 3350 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 RPL13P2-201ENST00000440687 659 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ACTG1P14-201ENST00000446382 1122 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AL121894.2-201ENST00000602977 491 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AC134407.3-201ENST00000624035 2139 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 POM121L14P-201ENST00000406100 1558 ntBASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ERGIC3Q9Y282 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AL591424.1-201ENST00000442569 1213 ntBASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 FDX1P1-201ENST00000449115 551 ntBASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 RPL13AP23-201ENST00000480739 586 ntBASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AC025048.3-201ENST00000590609 569 ntBASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AC005702.4-201ENST00000618393 416 ntBASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms